pRoloc - A unifying bioinformatics framework for spatial proteomics
The pRoloc package implements machine learning and visualisation methods for the analysis and interogation of quantitiative mass spectrometry data to reliably infer protein sub-cellular localisation.
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immunooncologyproteomicsmassspectrometryclassificationclusteringqualitycontrolbioconductorproteomics-dataspatial-proteomicsvisualisationopenblascpp
9.44 score 16 stars 2 dependents 1.5k downloadspRolocdata - Data accompanying the pRoloc package
Mass-spectrometry based spatial proteomics data sets and protein complex separation data. Also contains the time course expression experiment from Mulvey et al. 2015.
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experimentdatahomo_sapiens_datamassspectrometrydataarabidopsis_thaliana_datadrosophila_melanogaster_datamus_musculus_datastemcellproteomedatapkg
6.92 score 6 stars 1 dependents 255 scriptspRolocGUI - Interactive visualisation of spatial proteomics data
The package pRolocGUI comprises functions to interactively visualise spatial proteomics data on the basis of pRoloc, pRolocdata and shiny.
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proteomicsvisualizationgui
6.78 score 8 stars 3 scripts 644 downloads